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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103043766_103043857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103043766 - 103043857

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

AATTCATTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TATTTTGCAATT

Flanking Amino Acid:

LLGLDIKRQERNRLDILCCI

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

0.61

0.9

43.1

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

48.5

-0

2.1

72.41

39.3

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780