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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103043999_103044582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103043999 - 103044582

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

ACTCCCTGAATC

Flanking Amino Acid:

LLEDWMRPIVIALFVGVLSF

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

72.7

0.56

30.1

Major PPT

81.5

0.71

0.8

76.3

32.2

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

62.7

0.38

1.4

67.36

38.1

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780