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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103044673_103044787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103044673 - 103044787

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTACCCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

AAAACTTTACCC

Flanking Amino Acid:

GLDQSLSMPHDSYVMDYLSQ

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

63.3

0.33

1.1

41.2

Major PPT

0.5

75.7

32.9

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

52.7

0.06

1.6

59.69

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780