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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103045881_103046452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103045881 - 103046452

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAGCA

5'SS Class:

major

3'SS Sequence:

TGTATTGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GATTTCTGTATT

Flanking Amino Acid:

NTTGQFCNASVTDPSCTRCR

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

61.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

76.1

0.59

69.7

41.4

Minor 5ss

29.7

-2.3

3.4

40.1

45.4

Minor BPS

0.11

1.8

70.42

40.6

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780