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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103046583_103046969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103046583 - 103046969

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGATTATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTTCATTGACC

Flanking Amino Acid:

SDNPNPKCGKGGHAAYSSAV

Intron Amino Acid Position:

1022

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

67.1

39.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

75.1

0.57

68.9

40.9

Minor 5ss

31.3

-2.1

3.3

34.9

41.1

Minor BPS

71.4

0.65

1.6

80.33

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780