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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103047171_103048127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103047171 - 103048127

Intron Length:

957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTTA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCACAA

U12 Branch Point Sequence:

CTAACCACAACT

Flanking Amino Acid:

KGKNYRVFPYSVFYVFYEQY

Intron Amino Acid Position:

1089

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

75.2

37.7

Major BPS

48.8

-0

54.9

31.1

Major PPT

77.5

0.62

0.8

71.8

32.8

Minor 5ss

46.4

-0.4

3.1

64.5

46.9

Minor BPS

50.2

0.09

1.9

71.42

44.6

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780