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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103050277_103050927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103050277 - 103050927

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TCTCTCTTACTC

Flanking Amino Acid:

IFLPVLLSYIGPSVNKAKTH

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

77.3

0.62

0.8

76.5

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

58.4

0.24

1.6

66.76

39.6

Associated Gene:

Gene:

NPC1

Ensembl Gene ID:

ENSAPLG00000007737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035568

103030423 - 103051010

20588

ENSAPLT00000008095

103025231 - 103051010

25780