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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103058047_103059252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103058047 - 103059252

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGATTT

5'SS Class:

major

3'SS Sequence:

TTGTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ATTTGGTGAAAA

Flanking Amino Acid:

LVVVHHQDTETSVIFDIKLK

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

74.2

37.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

84.3

0.77

0.8

81.6

30.4

Minor 5ss

45.4

-0.5

2.9

65.3

45.9

Minor BPS

44.5

-0.4

2.5

64.02

Associated Gene:

Gene:

RMC1

Ensembl Gene ID:

ENSAPLG00000006991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021022

103052032 - 103067349

15318

ENSAPLT00000007274

103051456 - 103067349

15894