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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103062707_103063796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103062707 - 103063796

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TGTTTGTTAAAA

Flanking Amino Acid:

PQLEYTQECKTKNANILGFC

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

66.2

0.37

1.2

41.6

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

57.1

0.22

2.1

72.99

38.7

Associated Gene:

Gene:

RMC1

Ensembl Gene ID:

ENSAPLG00000006991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021022

103052032 - 103067349

15318

ENSAPLT00000007274

103051456 - 103067349

15894