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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103076986_103077451_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
103076986 - 103077451

Intron Length:
466

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTGGC

5'SS Class:
strong_major

3'SS Sequence:
TTACTGCTGGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCAAT

U12 Branch Point Sequence:
TTTTTCTTACTG

Flanking Amino Acid:
QDTRHDPYRADKPTTTPKKG

Intron Amino Acid Position:
251

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.2
0.85
0.9
72.3
37.8

Major BPS
76.9
0.67
1.2
85
31.9

Major PPT
69.8
0.44
1.1
65.7
40.7

Minor 5ss
39.1
-1.2
3.1
52.5
44.7

Minor BPS
68.5
0.44
1.6
74.4
38.6

Associated Gene:

Gene:
RIOK3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103069939 - 103079188
9250