Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_103231078_103232177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103231078 - 103232177

Intron Length:

1100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTGTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATCATTAGTC

Flanking Amino Acid:

SKNKALQNEQDLKDKTSLEN

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.1

0.54

65.6

44.9

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

54.6

0.13

1.8

66.14

39.1

Associated Gene:

Gene:

RBBP8

Ensembl Gene ID:

ENSAPLG00000005872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019156

103220644 - 103255845

35202

ENSAPLT00000006124

103220644 - 103255845

35202