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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103570446_103570821_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
103570446 - 103570821

Intron Length:
376

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGCTC

5'SS Class:
major

3'SS Sequence:
GAATATCTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGAAT

U12 Branch Point Sequence:
ATGCTTTGAATA

Flanking Amino Acid:
VEVAELLVHQGNANLDIQNV

Intron Amino Acid Position:
655

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
68.9
38.9

Major BPS
74.6
0.61
1.4
84
34.5

Major PPT
66.1
0.36
1
58.5
42.2

Minor 5ss
33.9
-1.8
3.7
49.6
47

Minor BPS
51.7
0.05
1.3
59.37
34.5

Associated Gene:

Gene:
MIB1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103553897 - 103621101
67205

103551132 - 103621101
69970