Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_103589906_103590932_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103589906 - 103590932

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

AATATGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AAAGTATTAATA

Flanking Amino Acid:

EDLLKRPDVDVNGQCAGHTA

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

83.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

70.3

0.46

59.1

46.3

Minor 5ss

35.6

-1.6

3.5

53.7

43.8

Minor BPS

49.3

-0

1.6

56.63

36.3

Associated Gene:

Gene:

MIB1

Ensembl Gene ID:

ENSAPLG00000005158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030258

103553897 - 103621101

67205

ENSAPLT00000005397

103551132 - 103621101

69970