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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_103635352_103636712_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
103635352 - 103636712
Intron Length:
1361

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTGCTGTCA
5'SS Class:
major
3'SS Sequence:
TCTCAATTTTTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTCAA
U12 Branch Point Sequence:
GCTTTCTCAATT
Flanking Amino Acid:
MIHQSETLGYRCVVFNNRGI
Intron Amino Acid Position:
165

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
65.8
0.37
1.1
58.4
36.8
Major BPS
85.7
0.89
0.8
85.9
22.5
Major PPT
76.7
0.6
0.8
73.9
35.4
Minor 5ss
30.6
-2.2
3.3
39.4
46
Minor BPS
64.6
0.54
1.5
76.39
40.7

Associated Gene:

Gene:
ABHD3
Ensembl Gene ID:
ENSAPLG00000004876
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000005043
103630813 - 103651348
20536