Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_103636759_103639551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103636759 - 103639551

Intron Length:

2793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGACTCCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAC

U12 Branch Point Sequence:

TTCCCTATGACT

Flanking Amino Acid:

NRGIAGEDLLTPRTYCAANT

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

74.7

0.62

1.1

65.7

Major PPT

76.4

0.59

0.9

69.1

36.8

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

58.8

0.36

1.6

77.63

38.8

Associated Gene:

Gene:

ABHD3

Ensembl Gene ID:

ENSAPLG00000004876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005043

103630813 - 103651348

20536