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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103694651_103695553_R


Intron Information:

Intron Rank:
32

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
103694651 - 103695553

Intron Length:
903

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAAAAC

5'SS Class:
major

3'SS Sequence:
CCTTCTGTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GGCTAAC

U12 Branch Point Sequence:
CTTTCTTTTCCC

Flanking Amino Acid:
IDCYLNIGLEVAICYVSSRP

Intron Amino Acid Position:
1872

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1
68.6
36.4

Major BPS
51.7
0.04
1.3
55.3
40.3

Major PPT
80.6
0.69
0.8
72.1
37.9

Minor 5ss
32.1
-2
3.2
42.9
44.3

Minor BPS
44.1
-0.4
3.6
69.99
42.1

Associated Gene:

Gene:
GREB1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103693523 - 103816292
122770

103693523 - 103816292
122770