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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103696329_103697620_R


Intron Information:

Intron Rank:
30

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
103696329 - 103697620

Intron Length:
1292

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGCAAG

5'SS Class:
major

3'SS Sequence:
GTTTAATGTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTAAT

U12 Branch Point Sequence:
TTGTGTTTAATG

Flanking Amino Acid:
LTQNVQYDLNRYFCEDVDFN

Intron Amino Acid Position:
1757

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1
68.8
43.8

Major BPS
81.8
0.79
1.1
84
34.5

Major PPT
71.8
0.49
1.1
62.6
47.3

Minor 5ss
37.3
-1.4
3.1
47.3
48.3

Minor BPS
61.1
0.21
1.8
66.43
42.4

Associated Gene:

Gene:
GREB1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103693523 - 103816292
122770

103693523 - 103816292
122770