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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103699034_103699687_R


Intron Information:

Intron Rank:
28

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
103699034 - 103699687

Intron Length:
654

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGAGAC

5'SS Class:
strong_major

3'SS Sequence:
GGTGTTTCCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTCCAT

U12 Branch Point Sequence:
TCCGTCTCCATT

Flanking Amino Acid:
LPGMFNNAGVGAARFLIKEL

Intron Amino Acid Position:
1626

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
71.3
32.5

Major BPS
64.7
0.37
1.3
74.7
40

Major PPT
72.9
0.52
0.9
69.5
41.6

Minor 5ss
30.9
-2.2
3.4
38.5
41.1

Minor BPS
44.1
-0.3
2
58.48
45.6

Associated Gene:

Gene:
GREB1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103693523 - 103816292
122770

103693523 - 103816292
122770