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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103707455_103708152_R


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
103707455 - 103708152

Intron Length:
698

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGTTTG

5'SS Class:
strong_major

3'SS Sequence:
TCTATTTCGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTCAC

U12 Branch Point Sequence:
TATCTGTTCACT

Flanking Amino Acid:
SNSSAVTGTSGSLADNGVSS

Intron Amino Acid Position:
1183

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1.2
78.8
38.3

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
75.1
0.56
1
69.4
41.6

Minor 5ss
39.2
-1.2
2.8
49.7
46.6

Minor BPS
48.1
-0
2.4
74.02
42.7

Associated Gene:

Gene:
GREB1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103693523 - 103816292
122770

103693523 - 103816292
122770