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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103708398_103708767_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
103708398 - 103708767

Intron Length:
370

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCTGTTA

5'SS Class:
major

3'SS Sequence:
TCGGCTTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAAACAA

U12 Branch Point Sequence:
GAAAACAAACCA

Flanking Amino Acid:
GKDPLGETFPRSLKYCDLRL

Intron Amino Acid Position:
1101

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.7
0.42
1.1
64.8
37.3

Major BPS
48.1
-0.1
0.9
53.4
30.8

Major PPT
78.4
0.64
0.9
72.4
37.7

Minor 5ss
33.9
-1.8
3.5
46.8
48.5

Minor BPS
35.6
-1.1
2
41.39
38.1

Associated Gene:

Gene:
GREB1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103693523 - 103816292
122770

103693523 - 103816292
122770