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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103727157_103728963_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
103727157 - 103728963

Intron Length:
1807

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGTCTG

5'SS Class:
strong_major

3'SS Sequence:
GTTTTTATGAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATGAAAG

Flanking Amino Acid:
NSGVRPVILIGYGTLPYFYG

Intron Amino Acid Position:
455

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.8
1.06
0.8
81.8
38.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
65.4
0.35
1.2
68
41.5

Minor 5ss
37.8
-1.4
3
49.5
46.7

Minor BPS
52.9
-0
1.9
66.8
40.3

Associated Gene:

Gene:
GREB1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103693523 - 103816292
122770

103693523 - 103816292
122770