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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103742210_103750444_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
103742210 - 103750444

Intron Length:
8235

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTTAGTGTC

5'SS Class:
major

3'SS Sequence:
TCTTTTCCCCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTGAA

U12 Branch Point Sequence:
GAAGATTTATCT

Flanking Amino Acid:
PAPEGSCTTDGFCQAGKDLR

Intron Amino Acid Position:
119

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
73.5
35.6

Major BPS
87.2
0.92
0.8
77.7
37.1

Major PPT
84.2
0.77
0.7
77.2
31.5

Minor 5ss
33.7
-1.9
3.1
42.4
38.7

Minor BPS
46.3
-0.2
1.8
59.76
43.2

Associated Gene:

Gene:
GREB1L

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103693523 - 103816292
122770

103693523 - 103816292
122770