Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_103908774_103909546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103908774 - 103909546

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TACTCCTACACT

Flanking Amino Acid:

LEQKERLEEEVKNLTLQLEQ

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

76.7

0.6

0.9

75.3

34.1

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

56.4

0.28

2.1

76.7

45.7

Associated Gene:

Gene:

ROCK1

Ensembl Gene ID:

ENSAPLG00000002696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021317

103854320 - 103938349

84030

ENSAPLT00000002836

103854320 - 103938349

84030