Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_103911833_103912845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103911833 - 103912845

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGCCCA

5'SS Class:

major

3'SS Sequence:

ATTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

ATTCTTTTTACA

Flanking Amino Acid:

QRKMQELQNEKETLTTQLDL

Intron Amino Acid Position:

887

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

57.9

41.1

Major BPS

82.6

0.81

0.8

71.7

Major PPT

89.2

0.88

0.7

30.3

Minor 5ss

-0.4

2.7

57.3

41.3

Minor BPS

58.8

0.27

1.6

70.37

35.1

Associated Gene:

Gene:

ROCK1

Ensembl Gene ID:

ENSAPLG00000002696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021317

103854320 - 103938349

84030

ENSAPLT00000002836

103854320 - 103938349

84030