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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103955339_103956778_F


Intron Information:

Intron Rank:
9

Intron Class:
minor

Intron Phase:
2

Intron Coordinates:
103955339 - 103956778

Intron Length:
1440

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGC|GTATCCTAA

5'SS Class:
minor

3'SS Sequence:
TAATTTTGTGAAG|C

3'SS Class:
strong_BPS

U2 Branch Point Sequence:
CCTTAAT

U12 Branch Point Sequence:
TTTTCCTTAATT

Flanking Amino Acid:
DQFFSIEFETAMKCTEAEEE

Intron Amino Acid Position:
255

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
47
-0.1
1.4
45.6
41.1

Major BPS
74.6
0.61
1.1
75.5
35.1

Major PPT
66.1
0.36
1.2
68
42.1

Minor 5ss
70.1
0.68
1.8
67.3
44.4

Minor BPS
95.9
1.52
0.5
104
16.3

Associated Gene:

Gene:
USP14

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

103946466 - 103962265
15800

103946466 - 103962265
15800