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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103959611_103961120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103959611 - 103961120

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCCACTTTAATT

Flanking Amino Acid:

DKKVNQQPKNSSKSDGAQKE

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.9

0.76

0.8

76.9

37.3

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

68.8

0.67

1.3

75.87

41.7

Associated Gene:

Gene:

USP14

Ensembl Gene ID:

ENSAPLG00000000901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038849

103946466 - 103962265

15800

ENSAPLT00000001141

103946466 - 103962265

15800