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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103967461_103967688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103967461 - 103967688

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACGTAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAA

U12 Branch Point Sequence:

TGTTACCAAGCA

Flanking Amino Acid:

DPENMVENKYKAVNNSNYGW

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

71.9

39.8

Major BPS

56.4

0.16

1.3

67.1

39.2

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

35.7

-1.6

2.9

41.9

39.1

Minor BPS

43.6

-0.4

2.2

62.22

43.3

Associated Gene:

Gene:

THOC1

Ensembl Gene ID:

ENSAPLG00000016149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030182

103963907 - 103981789

17883

ENSAPLT00000016883

103963907 - 103981789

17883