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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103969702_103971013_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

103969702 - 103971013

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTGATATTAAAG

Flanking Amino Acid:

NEGCPSFVKERPPDSKPMRP

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.4

41.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

56.3

0.21

2.5

76.3

39.1

Minor BPS

49.6

-0.1

1.8

58.39

42.8

Associated Gene:

Gene:

THOC1

Ensembl Gene ID:

ENSAPLG00000016149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016883

103963907 - 103981789

17883