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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103970147_103971013_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

103970147 - 103971013

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

TCTCCTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ACTTGTATAAAT

Flanking Amino Acid:

NEGCPSFVKERSQPEFQLGP

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.4

41.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

82.2

0.73

0.7

81.1

24.1

Minor 5ss

56.3

0.21

2.5

76.3

39.1

Minor BPS

47.5

-0.1

2.1

68.24

42.6

Associated Gene:

Gene:

THOC1

Ensembl Gene ID:

ENSAPLG00000016149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030182

103963907 - 103981789

17883