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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103977720_103978007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103977720 - 103978007

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAC

U12 Branch Point Sequence:

GCTTTTGGGACT

Flanking Amino Acid:

ARLFPLSEKSGLNLQSQFNL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

68.7

0.46

71.3

Major PPT

85.5

0.8

80.9

30.9

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

44.7

-0.3

2.1

63.28

41.6

Associated Gene:

Gene:

THOC1

Ensembl Gene ID:

ENSAPLG00000016149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030182

103963907 - 103981789

17883

ENSAPLT00000016883

103963907 - 103981789

17883