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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103978646_103979341_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103978646 - 103979341

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TACTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TATCTCTTAATG

Flanking Amino Acid:

VEKNVATWKSNTFYSAGKNY

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.5

0.66

0.9

76.6

37.1

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

70.6

0.51

1.3

69.76

37.5

Associated Gene:

Gene:

THOC1

Ensembl Gene ID:

ENSAPLG00000016149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016883

103963907 - 103981789

17883

ENSAPLT00000030182

103963907 - 103981789

17883