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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103980391_103980932_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103980391 - 103980932

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AAGTTTAAAACT

Flanking Amino Acid:

AFRVIVEEEIINKAPCENLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

79.9

32.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

79.4

0.66

0.8

80.5

31.5

Minor 5ss

40.2

-1.1

2.8

54.6

37.1

Minor BPS

46.9

-0.1

1.9

63.64

40.9

Associated Gene:

Gene:

THOC1

Ensembl Gene ID:

ENSAPLG00000016149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030182

103963907 - 103981789

17883

ENSAPLT00000016883

103963907 - 103981789

17883