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Intron Name: Anas_platyrhynchos_platyrhynchos_2_103981171_103981741_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

103981171 - 103981741

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGCAGC

5'SS Class:

weak_major

3'SS Sequence:

CACACTTTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GCCCTTGTAACT

Flanking Amino Acid:

SLPEARLRFTSSTREALHNK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.3

54.4

44.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

61.1

0.25

56.7

38.4

Minor 5ss

36.1

-1.6

2.9

47.6

41.5

Minor BPS

46.9

-0.1

60.79

43.5

Associated Gene:

Gene:

THOC1

Ensembl Gene ID:

ENSAPLG00000016149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030182

103963907 - 103981789

17883

ENSAPLT00000016883

103963907 - 103981789

17883