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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104005322_104005759_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

104005322 - 104005759

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

AATCACATCGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCACAT

U12 Branch Point Sequence:

ACTGGTTTAACG

Flanking Amino Acid:

SEPTSVPEANGCSPHWKNYT

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.7

34.9

Major BPS

68.9

0.47

Major PPT

59.8

0.22

0.9

52.4

36.6

Minor 5ss

45.7

-0.5

2.9

61.3

44.6

Minor BPS

50.6

-0.1

1.9

56.74

45.3

Associated Gene:

Gene:

COLEC12

Ensembl Gene ID:

ENSAPLG00000015987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016693

104001228 - 104095986

94759