Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_104152970_104154434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104152970 - 104154434

Intron Length:

1465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAA

U12 Branch Point Sequence:

TCTTTCTAAACA

Flanking Amino Acid:

CQKCQDNLLQDCPNVPELHI

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.8

27.8

Major BPS

64.6

0.36

1.3

64.8

42.4

Major PPT

76.9

0.61

0.9

73.9

34.5

Minor 5ss

37.7

-1.4

2.9

52.3

44.3

Minor BPS

0.62

1.6

78.35

38.8

Associated Gene:

Gene:

CLUL1

Ensembl Gene ID:

ENSAPLG00000015948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016637

104143784 - 104157918

14135