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Intron Name: Anas_platyrhynchos_platyrhynchos_2_10416588_10417925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10416588 - 10417925

Intron Length:

1338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTCAA

5'SS Class:

major

3'SS Sequence:

CCCTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TCTCCATTGATC

Flanking Amino Acid:

GNAELMETGDGVPVSSRVSA

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

68.6

37.7

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

75.4

0.57

0.8

68.6

31.8

Minor 5ss

39.8

-1.1

2.8

46.1

44.4

Minor BPS

58.6

0.25

1.6

68.38

37.3

Associated Gene:

Gene:

DIP2C

Ensembl Gene ID:

ENSAPLG00000002490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035133

10312877 - 10455174

142298

ENSAPLT00000002549

10312877 - 10457120

144244