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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104195287_104195464_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
104195287 - 104195464

Intron Length:
178

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTGTG

5'SS Class:
strong_major

3'SS Sequence:
ACTTATTTCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAA

U12 Branch Point Sequence:
TATGACTTATTT

Flanking Amino Acid:
FLVRESETTKGAYSLSIRDW

Intron Amino Acid Position:
230

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
77.9
36.9

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
73.6
0.53
0.9
65.9
40

Minor 5ss
42.4
-0.8
3.1
57.3
47.4

Minor BPS
54
0.2
1.9
74.03
42.9

Associated Gene:

Gene:
YES1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

104189011 - 104222871
33861