Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_104199672_104207022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104199672 - 104207022

Intron Length:

7351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTATAT

U12 Branch Point Sequence:

ACTGCTATATCT

Flanking Amino Acid:

VPSPYPSTLTGGVTVFVALY

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

49.5

-0

1.3

44.8

Major PPT

73.1

0.52

78.5

27.6

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

47.6

-0.1

1.9

66.66

44.4

Associated Gene:

Gene:

YES1

Ensembl Gene ID:

ENSAPLG00000015182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015864

104189011 - 104222871

33861