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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_104313436_104313604_R

Intron Information:

Intron Rank:
129344
Intron Class:
major
Intron Phase:
Intron Coordinates:
104313436 - 104313604
Intron Length:
169

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAACTCTG
5'SS Class:
strong_major
3'SS Sequence:
TATTTTTTCTTAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTTAT
U12 Branch Point Sequence:
TTTTTATGATAT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
81.2
0.74
1.1
72.7
44.5
Major BPS
96.5
1.15
0.6
86
34.2
Major PPT
85
0.79
0.7
85.1
29.3
Minor 5ss
43.4
-0.7
2.9
58.6
45.9
Minor BPS
48.1
-0
2
75.29
40.9

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000016803
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023964
104312233 - 104313772
1540
ENSAPLT00000020284
104312233 - 104314987
2755