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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104918199_104920169_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
104918199 - 104920169

Intron Length:
1971

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TATTGGTGTATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TGGGTGCTAACT

Flanking Amino Acid:
WENKSVKRSNRYSHLSSWQI

Intron Amino Acid Position:
308

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99.2
1.16
0.6
97
9.5

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
67.5
0.39
1.1
61.4
44.4

Minor 5ss
46.1
-0.4
2.8
66.9
44.4

Minor BPS
44.2
-0.3
2.3
64.53
45.9

Associated Gene:

Gene:
METTL4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

104910443 - 104928325
17883

104909369 - 104927191
17823

104909369 - 104927191
17823

104909369 - 104927191
17823