About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_104925752_104926688_R

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
104925752 - 104926688
Intron Length:
937

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATGTTCT
5'SS Class:
strong_major
3'SS Sequence:
ATTGCTCATTCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
GTTTTTTTCATT
Flanking Amino Acid:
GEDSVAVARKQKRKRKCVFN
Intron Amino Acid Position:
141

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
89.2
0.92
0.8
83.2
29.4
Major BPS
100
1.24
0.5
100
0
Major PPT
74.3
0.55
1
71
39.4
Minor 5ss
48.9
-0.1
2.4
68.1
42.9
Minor BPS
61.6
0.45
1.7
79.54
37.3

Associated Gene:

Gene:
METTL4
Ensembl Gene ID:
ENSAPLG00000015046
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000037847
104910443 - 104928325
17883
ENSAPLT00000034507
104909369 - 104927191
17823
ENSAPLT00000015678
104909369 - 104927191
17823