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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104928796_104929449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104928796 - 104929449

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTATCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTCTCCTTATCC

Flanking Amino Acid:

NNKMGLQTPQMKDRGTFGKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

0.85

0.9

39.9

Major PPT

76.2

0.59

0.8

73.2

31.4

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

75.6

0.78

1.6

82.19

38.3

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024847

104927212 - 104942291

15080

ENSAPLT00000015170

104928411 - 104942291

13881