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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104929537_104930429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104929537 - 104930429

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGACAG

5'SS Class:

major

3'SS Sequence:

TTTTTGTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TTTGTTGTCACA

Flanking Amino Acid:

SERKVSFFGKRTSGAGGSRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

56.3

42.4

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

0.79

0.7

84.8

Minor 5ss

33.8

-1.9

2.8

39.1

46.1

Minor BPS

45.3

-0.3

2.4

65.59

41.9

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024847

104927212 - 104942291

15080

ENSAPLT00000015170

104928411 - 104942291

13881