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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104930860_104932604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104930860 - 104932604

Intron Length:

1745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTTCCCCTATA

Flanking Amino Acid:

EEIPRVFKELGYPFALSKSS

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

75.9

34.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

83.1

0.74

0.7

77.9

24.2

Minor 5ss

42.1

-0.9

3.1

51.6

45.1

Minor BPS

49.5

-0

2.2

72.64

38.9

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015170

104928411 - 104942291

13881

ENSAPLT00000024847

104927212 - 104942291

15080