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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104932708_104933517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104932708 - 104933517

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCACCT

5'SS Class:

major

3'SS Sequence:

ATGTGCCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TGTATCTCAACA

Flanking Amino Acid:

ALVWLTDCVKLYSAMRENSS

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

44.9

Major BPS

74.2

0.6

0.9

75.7

Major PPT

75.1

0.57

0.9

70.5

40.6

Minor 5ss

38.8

-1.3

3.4

57.7

46.5

Minor BPS

63.5

0.42

1.6

73.23

38.1

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015170

104928411 - 104942291

13881

ENSAPLT00000024847

104927212 - 104942291

15080