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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104933608_104934804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104933608 - 104934804

Intron Length:

1197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTGA

5'SS Class:

major

3'SS Sequence:

AAATTGTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTCATGAAAA

Flanking Amino Acid:

ETDDGIVHNKLFMDYVVKCY

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

59.6

41.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.9

0.45

66.1

44.2

Minor 5ss

35.1

-1.7

3.4

47.8

47.7

Minor BPS

56.6

0.2

1.8

71.17

40.3

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024847

104927212 - 104942291

15080

ENSAPLT00000015170

104928411 - 104942291

13881