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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104935873_104936649_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104935873 - 104936649

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTTAGTAAA

5'SS Class:

major

3'SS Sequence:

CTGTTTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TCTGTTTTTACT

Flanking Amino Acid:

RLEKERESEPDRLVSLRKLR

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

75.7

35.4

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

75.2

0.57

0.9

70.3

40.1

Minor 5ss

31.9

-2.1

2.5

36.1

40.3

Minor BPS

0.3

1.7

74.6

42.8

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024847

104927212 - 104942291

15080

ENSAPLT00000015170

104928411 - 104942291

13881