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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104939493_104940766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104939493 - 104940766

Intron Length:

1274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

TTAATATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCCTAAAAT

Flanking Amino Acid:

LDDLYHQKLKEAEEEERKCA

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.9

0.67

0.9

73.3

40.8

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

75.3

0.87

1.7

93.4

34.6

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024847

104927212 - 104942291

15080

ENSAPLT00000015170

104928411 - 104942291

13881