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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104940898_104941711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104940898 - 104941711

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGCCT

5'SS Class:

major

3'SS Sequence:

CTTTACTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ATTTTCTGAATG

Flanking Amino Acid:

ATNELHDIQRQYQIVMQTTT

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

61.1

43.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

87.3

0.84

0.7

84.7

29.7

Minor 5ss

35.6

-1.6

3.4

54.6

43.2

Minor BPS

0.4

1.4

70.32

Associated Gene:

Gene:

NDC80

Ensembl Gene ID:

ENSAPLG00000014505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024847

104927212 - 104942291

15080

ENSAPLT00000015170

104928411 - 104942291

13881