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Intron Name: Anas_platyrhynchos_platyrhynchos_2_104995632_104996476_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104995632 - 104996476

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CCCCCCCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GATGTCTTAATT

Flanking Amino Acid:

QMLKAKIEIPSCKDVPPVEK

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

63.4

0.3

0.8

56.5

26.1

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

68.6

0.66

1.4

77.34

39.4

Associated Gene:

Gene:

SMCHD1

Ensembl Gene ID:

ENSAPLG00000013237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035642

104971149 - 105035789

64641

ENSAPLT00000030989

104970604 - 105035365

64762

ENSAPLT00000022243

104970604 - 105035739

65136

ENSAPLT00000013890

104970604 - 105035739

65136

ENSAPLT00000048156

104971149 - 105035739

64591